Package: imputeCGM 0.0.3

Shubh Saraswat
imputeCGM: Impute Missing Glucose Values in CGM Data
Imputes missing glucose values in repeated-measures continuous glucose monitoring (CGM) data. Workflows create time-series features from raw timestamps, support model selection, and return the user's original columns plus an imputed glucose column. Methods include multiple imputation by chained equations using 'mice' (Azur et al. (2011) <doi:10.1002/mpr.329>), Random Forest regression using 'ranger' (Breiman (2001) <doi:10.1023/A:1010933404324>), k-nearest-neighbor regression using 'FNN' (Zhang (2016) <doi:10.21037/atm.2016.03.37>), 'XGBoost' using 'xgboost' (Chen and Guestrin (2016) <doi:10.1145/2939672.2939785>), 'LightGBM' using 'lightgbm' (Ke et al. (2017) <https://papers.nips.cc/paper/6907-lightgbm-a-highly-efficient-gradient-boosting-decision>), and ARIMA forecasting using 'forecast' (Hyndman and Khandakar (2008) <doi:10.18637/jss.v027.i03>). A 'Python'-compatible backend uses 'reticulate' to call 'pandas', 'scikit-learn', 'statsmodels', 'xgboost', and optional 'lightgbm'.
Authors:
imputeCGM_0.0.3.tar.gz
imputeCGM_0.0.3.zip(r-4.7)imputeCGM_0.0.3.zip(r-4.6)imputeCGM_0.0.3.zip(r-4.5)
imputeCGM_0.0.3.tgz(r-4.6-any)imputeCGM_0.0.3.tgz(r-4.5-any)
imputeCGM_0.0.3.tar.gz(r-4.7-any)imputeCGM_0.0.3.tar.gz(r-4.6-any)
imputeCGM_0.0.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
imputeCGM/json (API)
| # Install 'imputeCGM' in R: |
| install.packages('imputeCGM', repos = c('https://zhanglabuky.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/zhanglabuky/imputecgmr/issues
Pkgdown/docs site:https://zhanglabuky.github.io
- CGMExmplDat10Pct - Example dataset for CGMissingData
- CGMExmplDat5Pct - Example dataset for CGMissingData
Last updated from:6617d693e5. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 204 | ||
| source / vignettes | OK | 234 | ||
| linux-release-x86_64 | OK | 244 | ||
| macos-release-arm64 | OK | 139 | ||
| macos-oldrel-arm64 | OK | 94 | ||
| windows-devel | OK | 122 | ||
| windows-release | OK | 114 | ||
| windows-oldrel | OK | 117 | ||
| wasm-release | OK | 146 |
Exports:run_apprun_missing_glucose_imputationrun_missingness_benchmark
Dependencies:backportsbase64encbitbit64bootbroombslibcachemCGManalyzerclicliprcodetoolscolorspacecommonmarkcpp11crayondata.tabledigestdplyrfarverfastmapFNNfontawesomeforcatsforeachforecastfracdifffsgenericsggplot2glmnetgluegtablehavenherehmshtmltoolshttpuvisobanditeratorsjomojquerylibjsonlitelabelinglaterlatticelifecyclelightgbmlme4lmtestmagrittrMASSMatrixmemoisemicemimeminqamitmlnlmenloptrnnetnumDerivordinalotelpanpillarpkgconfigpngprettyunitsprogresspromisespurrrR6rangerrappdirsrbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRcppTOMLRdpackreadrreformulasreticulaterlangrpartrprojrootS7sassscalesshapeshinysourcetoolsstringistringrsurvivaltibbletidyrtidyselecttimeDatetzdbucminfurcautf8vctrsviridisLitevroomwithrxgboostxtablezoo
Last update: 2026-07-13
Started: 2026-06-28
Last update: 2026-07-08
Started: 2026-06-28
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Example dataset for CGMissingData | CGMExmplDat10Pct |
| Example dataset for CGMissingData | CGMExmplDat5Pct |
| Launch the imputeCGM Shiny App | run_app |
| Impute missing glucose values using selectable MICE-based methods | run_missing_glucose_imputation |
| Run missingness benchmark (target-masking with LAG features) | run_missingness_benchmark |