Package: imputeCGM
Title: Impute Missing Glucose Values in CGM Data
Version: 0.0.3
Authors@R: c(
    person("Shubh", "Saraswat", email = "shubh.saraswat00@gmail.com", role = c("cre", "aut", "cph"),
    comment = c(ORCID = "0009-0009-2359-1484")),
    person("Hasin Shahed Shad", email = "hasin.shad@uky.edu", role = "aut"),
    person("Xiaohua Douglas", "Zhang", email = "douglas.zhang@uky.edu", role = "aut",
    comment = c(ORCID = "0000-0002-2486-7931")))
Description: Imputes missing glucose values in repeated-measures
        continuous glucose monitoring (CGM) data. Workflows create
        time-series features from raw timestamps, support model
        selection, and return the user's original columns plus an
        imputed glucose column. Methods include multiple imputation by
        chained equations using 'mice' (Azur et al. (2011)
        <doi:10.1002/mpr.329>), Random Forest regression using 'ranger'
        (Breiman (2001) <doi:10.1023/A:1010933404324>),
        k-nearest-neighbor regression using 'FNN' (Zhang (2016)
        <doi:10.21037/atm.2016.03.37>), 'XGBoost' using 'xgboost' (Chen
        and Guestrin (2016) <doi:10.1145/2939672.2939785>), 'LightGBM'
        using 'lightgbm' (Ke et al. (2017)
        <https://papers.nips.cc/paper/6907-lightgbm-a-highly-efficient-gradient-boosting-decision>),
        and ARIMA forecasting using 'forecast' (Hyndman and Khandakar
        (2008) <doi:10.18637/jss.v027.i03>). A 'Python'-compatible
        backend uses 'reticulate' to call 'pandas', 'scikit-learn',
        'statsmodels', 'xgboost', and optional 'lightgbm'.
License: GPL (>= 2)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Depends: R (>= 4.3)
RoxygenNote: 7.3.3
Imports: mice, FNN, ranger, data.table, xgboost, lightgbm, forecast,
        CGManalyzer, lifecycle, reticulate, shiny
Suggests: testthat (>= 3.0.0), spelling, knitr, rmarkdown
Config/testthat/edition: 3
NeedsCompilation: no
Language: en-US
URL: https://zhanglabuky.github.io/imputeCGMr/,
        https://github.com/ZhangLabUKY/imputeCGMr
BugReports: https://github.com/ZhangLabUKY/imputeCGMr/issues
LazyData: true
VignetteBuilder: knitr
Config/pak/sysreqs: cmake make libicu-dev libpng-dev libuv1-dev python3
        libx11-dev zlib1g-dev
Repository: https://zhanglabuky.r-universe.dev
Date/Publication: 2026-07-17 15:43:22 UTC
RemoteUrl: https://github.com/zhanglabuky/imputecgmr
RemoteRef: HEAD
RemoteSha: 6617d693e56fdb4f8a7192753fc97e8cc97e1d6b
Packaged: 2026-07-17 16:54:42 UTC; root
Author: Shubh Saraswat [cre, aut, cph] (ORCID:
    <https://orcid.org/0009-0009-2359-1484>),
  Hasin Shahed Shad [aut],
  Xiaohua Douglas Zhang [aut] (ORCID:
    <https://orcid.org/0000-0002-2486-7931>)
Maintainer: Shubh Saraswat <shubh.saraswat00@gmail.com>